ToolsStudents at Arc

Central to Arc’s mission is not only developing state-of-the-art technologies, but also making them widely available to accelerate biomedical research across the globe. At Arc’s Tools Portal, we’re sharing our growing list of computational tools developed by Arc scientists, along with supporting publications, documentation, and code. 

Check back often, as we’ll be posting new tools as they are launched, and feel free to contact us at tools@arcinstitute.org with any questions.

Software & Tools

Algorithms, software, analysis pipelines, and machine learning models to extract new insights, accelerate discovery, predict biological outcomes, and visualize results.

Genome Engineering Tools

Cas13d Guide Design Tool

Built from the largest Cas13d knockdown dataset to date, Arc's deep learning-powered Cas13d Guide RNA Selection Tool nominates high-efficiency guide sequences and any custom RNA sequences for knocking down your transcript of interest across human, mouse, other model organisms, and custom sequences. Wei et al, Cell Systems 2023

ScreenPro2

ScreenPro2 is a tool for flexible pooled CRISPR screen analysis.